Arc 2Root’s Fall
Hagoromo joined the Anbu while continuing to train his students, then helped expose Shimura Danzō’s crimes and stop his attempt to seize Shisui’s eye. Hiruzen and the clan leaders confronted the crisis, and Danzō was captured after Root tried to flee Konoha.
- Hiruzen ordered Danzō to leave Root’s affairs alone and asked Kakashi to investigate Root, while Hagoromo earned a high lesson rating and accepted weekend missions without giving up teaching.
- Hiruzen gave Hagoromo the Shadow Clone Technique and Earth Release: Earth Dragon Bullet, and Hagoromo used clones to train Naruto, Choji, Shikamaru, and later Ino.
- Kakashi recruited Hagoromo into Anbu as Mirror Flower, and Hagoromo passed an assessment mission by infiltrating a bandit stronghold and uncovering stolen goods linked to Konoha and the Land of Rice Fields.
- Hagoromo trained his students in Chakra control, Nature Transformation, and physical conditioning, while Shisui told Hiruzen he planned to use Kotoamatsukami to prevent an Uchiha coup.
- Hagoromo discovered Danzō’s agents near Naka Shrine, then intervened when Danzō attacked Shisui and took his right eye, helping Shisui escape with his remaining eye.
- Hagoromo brought Shisui to Hiruzen and accused Danzō of murder, secret experiments, and plotting to seize power, while Hiruzen ordered a lockdown and an investigation of Anbu for Root seals.
- Hiruzen apologized to Konoha’s Jonin and clan heads, and Uchiha Fugaku pledged the clan’s cooperation as they agreed to try to repair relations between the village and clan.
- Danzō ordered Root to abandon Konoha, but Itachi, Shikaku, Inoichi, and other forces confronted them, subdued Danzō, and ordered the Root ninja to surrender.