Arc 4The Holy Church Takes Root
Phil’s rescue of Nagato set events in motion as the Holy Church helped Minato free Konoha from Danzo’s control and expanded across the great nations. Years later, Sasuke and Boruto arrived from another future, but Obito stole their time-traveling turtle and prepared to travel to the past.
- Phil rescued Yahiko and Konan from Hanzō, but Obito abducted Nagato and manipulated him into joining Akatsuki.
- Hexia’s team exposed Orochimaru’s human experiments, and Minato accepted Hiruzen’s cover-up before Orochimaru joined Akatsuki.
- Obito attacked during Naruto’s birth and released the Nine-Tails, but Meizi summoned the Light Spirits to seal it while Minato rescued Kushina.
- Minato allied with the Holy Church, freed Kushina from Root, and removed Danzo and the elders from power as Danzo was executed.
- Ria was crowned Archbishop, and she revealed to Nagato that Yahiko and Konan were alive before Obito escaped with Black Zetsu.
- Akatsuki lost members to the Holy Church over the following decade, while the Church spread across the great nations and Kirigakure became isolated.
- Sasuke and Boruto arrived in a parallel past without the Holy Church, where Boruto startled Naruto’s family by calling him Dad.
- Black Zetsu stole Boruto’s turtle from Naruto’s room, and Obito used his Mangekyō to control it and prepare to travel to the past.